Computational Methods for Paleogenomics and Comparative Genomics


Cedric Chauve

Professor, Department of Mathematics, SFU.

Email: cedric.chauve [at] sfu.ca.



Current members



Aniket Mane

PhD student, Department of Mathematics, SFU.


Fatih Karaoglanoglu

PhD student, Computer Science, SFU (co-supervised with Faraz Hach).


Alice Yue.

PhD student, Computer Science at SFU (co-supervised with Ryan Brinkman).


Baraa Orabi

PhD student, Computer Science, UBC (co-supervised with Faraz Hach).



Alumni.



Pedro Feijao

Post-Doctoral Fellow, SFU, (co-supervised with Leonid Chindelevitch).

Currently Computational Scientist at Canexia Health.


Stepan Grynek

Post-Doctoral Fellow, BC Cancer Agency, (co-supervised with Sara Mostafavi and Ryan Brinkman).

Currently Post-Doctoral Fellow Icahn School of Medicine at Mount Sinai


Ehsan Haghshenas

PhD student, Computer Science, SFU (co-supervised with Cenk Sahinalp and Faraz Hach).

Currently at Ocean Genomics


Fang Zhang.

MSc student, Computer Science at SFU (co-supervised with Leonid Chindelevitch).


Stanley Guo

MSc student, Computer Science at SFU (co-supervised with Leonid Chindelevitch).

Currently at Amazon.


Robert Mueller.

Visiting PhD student, Mathematics at SFU and Bioinformatics at Bielefeld University.

Currently: PhD student at Bielefeld University.


Mark Forteza

Undergraduate intern, NSERC USRA, SFU.

Currently Junior accountant.


Etienne Lasalle

Visiting intern, ENS Cachan, co-supervised with Leonid Chindelevitch.


Hua-Ting Yao

Visiting intern, Ecole Polytechnique, co-supervised with Leonid Chindelevitch.

Currently PhD student at Ecole Polytechnique, personal page.


Hugo Menet

Visiting intern, ENS Lyon.

Currently PhD student at University of Lyon.


Sean La

Undergraduate intern, NSERC USRA, SFU.

Currently graduate student at UBC: personal page.


Markus Lux

Visiting PhD student, Didy Graduate program, Bielefeld University (co-supervised in Vancouver with Ryan Brinkman).


Nina Luhmann.

PhD student, Didy Graduate program, Bielefeld University (co-supervised with Jens Stoye and Roland Wittler).

Currently Research Fellow at University of Warwick.


Nicole Althermeler.

Visiting PhD student, Didy Graduate program, Bielefeld University (co-supervised in Vancouver with Leonid Chindelevitch).


Akbar Rafiey

MSc student, Department of Mathematics, SFU (co-supervised with Jan Manuch and Ladislav Stacho).

Currently PhD student in Computer Science at SFU.


Jonathan Mendes de Almeida

MITACS Globalink intern.


Yoann Anselmetti.

Visiting PhD student, University of Montpellier.

Currently Post-Doctoral fellow in team CoBius, Unversity of Sherbrooke.


Julien Courtiel

PIMS-CNRS Postdoctoral fellow, PIMS (co-supervised with Marni Mishna and Yann Ponty).

Currently Assistant Professor in Caen University.


Koen van Greevenbroek

BSc intern, Department of Mathematics, SFU.


Beryl Zhuang

MSc intern, Bioinformatics Training Program for Health Research (co-supervised with Will Hsiao).


Ashok Rajaraman

PhD student, Department of Mathematics, SFU.

Currently Data Scientist at Accenture.


Bradley Jones

MSc student, Department of Mathematics, SFU (co-supervised with Karen Yeats).

Currently PhD student at the BC Centre for Excellence in HIV/AIDS.


Joao Paulo Pereira Zanetti.

Visiting PhD student, University of Campinas (September 2013-July 2014).


Daniel Doerr.

Visiting PhD student, University of Bielefeld (January-April 2014).

Currently Post-Doctoral Fellow at Institute f. Med. Biometry and Bioinformatics, University Hospital Düsseldorf.


Jake Turner

Undergraduate intern (NSERC USRA, summer 2014), Department of Mathematics, SFU (co-supervised with Tamon Stephen).


Other Alumni: follow this link.